Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873800.1_cds_XP_016435289.1_31265
CDS Infomation

[gene=LOC107761569] [db_xref=GeneID:107761569] [protein=uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic-like] [protein_id=XP_016435289.1] [location=complement(join(158102..158275,158679..158795,159145..159323,160039..160136,160227..160492,161076..161231,161341..161529,161778..161888,162502..162644,163523..163649,163730..163795))] [gbkey=CDS]
Sequence

ATGGCAGTAGTTACAGTGTTAAGGGGTGTCTCTCATGGCCGCTTACCACTACTCCCTCAC
TCTCAGTTGCCAATTGTAAGCGTCACAGGTAGAGCAAGAAACATTGGTTATTATGGGAAT
CATCGTCCCAATGTTTTGCGAATTTATGCTCGTTATTCACAGGCTCAGGATCTATTCACT
ACTCGTCTTCAAGATCGTCTAGAGAACTTGCCCAAACTTGTGGAGGATATTGTCCAAACA
TCTCTAAACACAGGTCCTCGTGGAGCCTTAAGGCTAGCTCAGGGTGTCCAAGCTGTAGTT
GGAGTAGGCAGCGAGTGGCTGCAAGACGTATCTAAGACAAACTCGTCCACAGGACTACCA
ACTCAGCTGCAGCTTGGGCTATTATCTCCCCTATATTTGAGGAAATTGTTTGAACGCATG
GGTGCAACTTATATCAAATTAGGTCAGTTTATTGCATCCGCACCCACGTTGTTTCCACCA
GAGTATGTTCAAGAATTCCAGTACTGTTTTGACAGGGCTCCTGCAGTTCCTTTTGAAGAG
ATCCAAACAATCTTGCGCGAGGAACTAGGCCGACCAATTGATACCGTGTTTGAGTATGTT
GATCCCACTCCACTTGCGTCTGCATCTATTGCTCAGGTGCATGGTGCAAGAATAAGAGGC
ACAGGAGAGGATGTAGTGATAAAGGTTTTGAAACCTGGAATAGAAGATATTTTGGTAGCA
GATCTAAACTTTGTGTACATTGTAGCACGTATCCTGGAGTTTTTGAGTCCTGATCTAAGC
CGTGCATCTCTGGTAGCTATTGTCAAAGACATACGAGAATCAATGCTAGAAGAAGTTGAC
TTCAAGAAGGAGGCTGCAAATGTTGAGTCATTCAGGAGGTATTTAGAAGCCATGGGACTT
ACTAAGCAGGCCACTGCTCCAAAAGTCTACCCTCAATGTAGTACTAAGCGTGTTCTGACA
ATGGAGAGGCTATATGGAGTTCCTTTGACGGATTTAGACTCTATTAAGTCACTGGTTTCT
AGTCCTGAGACCAGTCTTATTACTGCCCTAAATGTTTGGTTTGGAAGTTTGCTCGCCTGT
GAATCCTTCCATGCAGATGTACATGCTGGCAATTTGTGGCAACTACGCGATGGGCGTATT
GGGTTCCTTGACTTCGGAATTGTTGGTCGTATATCTCCAAAGACATGGGCTGCAATGGAA
GTATTTCTGCAATCTATAACAATTGAAGATTATGAGTCGATGGCATCTGCTCTAATTGAC
ATGGGTGCTACCGGGAAGGATGTGGATTCAAAGGCTTTTGCGAGTGACTTGGAGAAAATA
TTTTTGTCAATTCAGGATTTGGATACAGAAATCATTGTTGCTGCTGCAAGGGACACAAAT
ACAAATGCAACCGCTGTTGCTGCCAATGTAGTATTTGATGAGAGGCAGATGAATGCTCTA
TTCGTGGATGTGGTTAGAGTTAGTGAATCTTACGGATTGAAATTTCCTCGTGAGTTTGCA
CTTTTGTTGAAGCAACTTCTCTATTTTGATCGATACACCAGATTGTTAGCTCCAAATATG
AACATGTACCGAGATCAGAGGATCAAGCTTGTCTCTGATAGAAGACAAAGGAACATATAC
CAATGA

Peptide Sequence

PEP ID

XP_016435289.1
PEP Infomation

PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVVTVLRGVSHGRLPLLPHSQLPIVSVTGRARNIGYYGNHRPNVLRIYARYSQAQDLFT
TRLQDRLENLPKLVEDIVQTSLNTGPRGALRLAQGVQAVVGVGSEWLQDVSKTNSSTGLP
TQLQLGLLSPLYLRKLFERMGATYIKLGQFIASAPTLFPPEYVQEFQYCFDRAPAVPFEE
IQTILREELGRPIDTVFEYVDPTPLASASIAQVHGARIRGTGEDVVIKVLKPGIEDILVA
DLNFVYIVARILEFLSPDLSRASLVAIVKDIRESMLEEVDFKKEAANVESFRRYLEAMGL
TKQATAPKVYPQCSTKRVLTMERLYGVPLTDLDSIKSLVSSPETSLITALNVWFGSLLAC
ESFHADVHAGNLWQLRDGRIGFLDFGIVGRISPKTWAAMEVFLQSITIEDYESMASALID
MGATGKDVDSKAFASDLEKIFLSIQDLDTEIIVAAARDTNTNATAVAANVVFDERQMNAL
FVDVVRVSESYGLKFPREFALLLKQLLYFDRYTRLLAPNMNMYRDQRIKLVSDRRQRNIY
Q

Transcript Sequence

Gene sequence data has not been registered.